Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spfh/band 7/phb domain protein | CSX02_04910 | Not Available | Negative | 1020970 - 1021923 | 34806.6 |
| nfed family protein | CSX02_04915 | Not Available | Negative | 1021914 - 1022390 | 17501.1 |
| hypothetical protein | CSX02_04920 | Not Available | Negative | 1022452 - 1022853 | 15129.4 |
| hypothetical protein | CSX02_04925 | Not Available | Positive | 1022998 - 1023336 | 12893.2 |
| hypothetical protein | CSX02_04930 | Not Available | Negative | 1023415 - 1023594 | 6416.01 |
| hypothetical protein | CSX02_04935 | Not Available | Negative | 1023585 - 1023908 | 11957.2 |
| aldo/keto reductase | CSX02_04940 | Not Available | Positive | 1024043 - 1024897 | 32359.5 |
| short-chain dehydrogenase | CSX02_04945 | Not Available | Negative | 1025086 - 1025862 | 27309.8 |
| aspartate aminotransferase | CSX02_04950 | Not Available | Negative | 1025976 - 1027169 | 44618.2 |
| crp/fnr family transcriptional regulator | CSX02_04955 | Not Available | Negative | 1027185 - 1027790 | 23483.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

