Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0 subunit c | CSX02_04855 | Not Available | Negative | 1012560 - 1012820 | 8351.4 |
| atp synthase f0 subunit a | CSX02_04860 | Not Available | Negative | 1012853 - 1013590 | 27106.0 |
| f0f1-atpase subunit | CSX02_04870 | Not Available | Negative | 1014049 - 1014285 | 8986.32 |
| cytidine deaminase | CSX02_04875 | Not Available | Negative | 1014472 - 1014981 | 19261.0 |
| low molecular weight phosphatase family protein | CSX02_04880 | Not Available | Negative | 1014935 - 1015432 | 18421.4 |
| threonylcarbamoyl-amp synthase | CSX02_04885 | Not Available | Negative | 1015440 - 1016498 | 37828.5 |
| 4fe-4s dicluster domain-containing protein | CSX02_04890 | Not Available | Positive | 1016731 - 1016901 | 5394.27 |
| replicative dna helicase | CSX02_04895 | Not Available | Negative | 1016958 - 1018310 | 50453.6 |
| 50s ribosomal protein l9 | CSX02_04900 | Not Available | Negative | 1018324 - 1018770 | 15947.5 |
| dhh family phosphoesterase | CSX02_04905 | Not Available | Negative | 1018767 - 1020818 | 76986.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

