Alteribacter lacisalsi strain YSP-3 ZB100012

Kingdom

Bacillati

Phylum

Bacillota

Class

Bacilli

Order

Caryophanales

Family

Bacillaceae

Genus

Alteribacter

Description

Alteribacter lacisalsi strain YSP-3 ZB100012 is a bacterial strain identified by its single replicon, which is significant in its genomic structure. The strain is cataloged under the accession number PDOF00000000.1, providing a reference for further research and analysis. This strain belongs to the genus Alteribacter, which is known for its role in various ecological contexts, particularly in relation to its environmental adaptations. While specific metabolic pathways and ecological roles of Alteribacter lacisalsi strain YSP-3 ZB100012 are not detailed, its classification suggests potential contributions to biogeochemical cycles or interactions with other microorganisms in its habitat. The presence of a single replicon can indicate a streamlined genome, which may be an adaptation to specific ecological niches. This trait could enhance the organism's efficiency in resource utilization or its ability to thrive under particular environmental conditions. Overall, the characterization of Alteribacter lacisalsi strain YSP-3 ZB100012 contributes to our understanding of microbial diversity and the functional roles of bacteria within their ecosystems. Further studies on this strain could reveal insights into its ecological significance and potential applications in biotechnology or environmental microbiology.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassBacilli
OrderCaryophanales
FamilyBacillaceae
GenusAlteribacter
SpeciesAlteribacter lacisalsi
Strainstrain YSP-3 ZB100012

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Alteribacter lacisalsi strain YSP-3 ZB100012
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alteribacter lacisalsi strain YSP-3 ZB100012, whole genome shotgun

Gene Summary

Adenine Count

1042960 bp

Thymine Count

1051524 bp

Guanine Count

974637 bp

Cytosine Count

978722 bp

Genome Length

4047843 bp

Protein-coding Genes

3874 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dead/deah box helicaseCR205_08825Not AvailableNegative1769264 - 177058349883.4
hypothetical proteinCR205_08830Not AvailablePositive1770831 - 177159525279.9
transcriptional regulatorCR205_08835Not AvailablePositive1771765 - 177225918563.2
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseCR205_08840Not AvailablePositive1772413 - 177338735737.8
nif3-like dinuclear metal center hexameric proteinCR205_08845Not AvailableNegative1773438 - 177455640483.4
trna (adenine(22)-n(1))-methyltransferase trmkCR205_08850Not AvailableNegative1774553 - 177526625778.0
cytochrome c551CR205_08855Not AvailableNegative1775381 - 177575813175.0
glycerophosphodiester phosphodiesteraseCR205_08860Not AvailableNegative1775928 - 177666828100.7
rna polymerase sigma factor rpodCR205_08865Not AvailableNegative1776985 - 177810942884.3
dna primaseCR205_08870Not AvailableNegative1778152 - 177997869783.4

Displaying genes 1761 – 1770 of 3959 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.