Longimonas halophila strain KCTC 42399

facultative anaerobe

Kingdom

Pseudomonadati

Phylum

Rhodothermota

Class

Rhodothermia

Order

Rhodothermales

Family

Salisaetaceae

Genus

Longimonas

Description

Longimonas halophila strain KCTC 42399 is a facultative anaerobe, allowing it to survive and thrive in environments with varying oxygen availability. This adaptability is significant in ecological contexts where oxygen levels fluctuate, such as in saline or hypersaline habitats. The strain is characterized by having a single replicon, which is indicative of its genomic structure and can be relevant in studies of its genetic stability and replication mechanisms. The genome of Longimonas halophila strain KCTC 42399 is accessible through the accession number PDEP00000000.1, providing a resource for researchers interested in its genetic makeup and potential applications. Overall, the traits of Longimonas halophila strain KCTC 42399 emphasize its versatility in adapting to different environmental conditions, which can be crucial for its survival and ecological interactions in saline ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumRhodothermota
ClassRhodothermia
OrderRhodothermales
FamilySalisaetaceae
GenusLongimonas
SpeciesLongimonas halophila
Strainstrain KCTC 42399

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Longimonas halophila strain KCTC 42399

Gene Summary

Adenine Count

742083 bp

Thymine Count

731753 bp

Guanine Count

1130451 bp

Cytosine Count

1125683 bp

Genome Length

3729970 bp

Protein-coding Genes

2924 genes

Non-Coding Genes

49 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endonuclease ivCRI93_00815Not AvailableNegative201158 - 20199429991.4
group 1 glycosyl transferaseCRI93_00820Not AvailableNegative202065 - 20333646720.9
hypothetical proteinCRI93_00825Not AvailableNegative203485 - 20604995326.5
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit cCRI93_00830Not AvailableNegative206099 - 20639510997.7
rna polymerase subunit sigmaCRI93_00835Not AvailableNegative206574 - 20741332663.1
gh3 auxin-responsive promoterCRI93_00840Not AvailableNegative207877 - 20944858729.9
dihydropteroate synthaseCRI93_00845Not AvailablePositive209655 - 21056331647.8
tigr00159 family proteinCRI93_00850Not AvailablePositive210581 - 21137529286.0
protein-l-isoaspartate o-methyltransferaseCRI93_00855Not AvailablePositive211449 - 21209924387.0
6-phosphogluconate dehydrogenase (decarboxylating)CRI93_00860Not AvailablePositive212693 - 21360432818.8

Displaying genes 161 – 170 of 2973 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.