Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CQW34_00729 | Not Available | Positive | 879100 - 879396 | 11211.5 |
| helix-turn-helix domain protein | CQW34_00730 | Not Available | Positive | 879403 - 879705 | 12042.3 |
| phage integrase family protein | CQW34_00731 | Not Available | Negative | 879771 - 880127 | 13223.1 |
| phage integrase sam-like domain protein | CQW34_00732 | Not Available | Negative | 880094 - 880999 | 36003.4 |
| virulence protein rhum family protein | CQW34_00733 | Not Available | Negative | 881393 - 882391 | 39487.9 |
| hypothetical protein | CQW34_00734 | Not Available | Negative | 882394 - 883245 | 32847.0 |
| hypothetical protein | CQW34_00735 | Not Available | Negative | 883247 - 883837 | 22825.9 |
| putative abieii-like type iv ta system toxin with aaa domain | CQW34_00736 | Not Available | Negative | 883845 - 885221 | 53007.9 |
| putative tir-like domain (duf1863) protein | CQW34_00737 | Not Available | Positive | 885433 - 885840 | 15456.4 |
| caspase domain protein | CQW34_00738 | Not Available | Positive | 885853 - 886833 | 35833.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



