Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xylose isomerase | CQW34_00339 | Not Available | Negative | 405623 - 407023 | 50677.8 |
| xylulose kinase | CQW34_00340 | Not Available | Negative | 407113 - 408618 | 54802.0 |
| nudix domain protein | CQW34_00341 | Not Available | Negative | 408671 - 409402 | 28455.8 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | CQW34_00342 | Not Available | Positive | 409744 - 410577 | 29724.1 |
| malonyl coa-acyl carrier protein transacylase | CQW34_00343 | Not Available | Positive | 410681 - 411568 | 31253.7 |
| succinyl-coa ligase (adp-forming) subunit beta | CQW34_00344 | Not Available | Positive | 411774 - 412922 | 42179.3 |
| succinyl-coa ligase (adp-forming) subunit alpha | CQW34_00345 | Not Available | Positive | 412919 - 413788 | 30007.6 |
| hypothetical protein | CQW34_00346 | Not Available | Positive | 413830 - 414000 | 6716.81 |
| hypothetical protein | CQW34_00347 | Not Available | Positive | 413997 - 414233 | 8908.89 |
| winged helix-turn-helix domain (duf2582) | CQW34_00348 | Not Available | Positive | 414898 - 415107 | 7975.51 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



