Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | CQW34_03139 | Not Available | Negative | 3856859 - 3857209 | 13232.4 |
| 50s ribosomal protein l35 | CQW34_03140 | Not Available | Negative | 3857310 - 3857507 | 7420.28 |
| translation initiation factor if-3 | CQW34_03141 | Not Available | Negative | 3857573 - 3858226 | 24962.2 |
| threonine--trna ligase | CQW34_03142 | Not Available | Negative | 3858303 - 3860243 | 74410.4 |
| putative tpr repeat-containing protein, yrrb-like | CQW34_03143 | Not Available | Negative | 3860324 - 3862372 | 78072.5 |
| 6-bladed beta-propeller | CQW34_03144 | Not Available | Positive | 3862674 - 3863891 | 47227.4 |
| peptide deformylase | CQW34_03145 | Not Available | Negative | 3864001 - 3864555 | 21102.7 |
| putative holliday junction resolvase | CQW34_03146 | Not Available | Negative | 3864591 - 3865007 | 15820.4 |
| outer membrane protein 40 precursor | CQW34_03147 | Not Available | Negative | 3865129 - 3866247 | 40018.7 |
| putative exopolysaccharide biosynthesis protein, ybjh-like | CQW34_03148 | Not Available | Negative | 3866309 - 3867055 | 28141.0 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



