Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative spermidine/putrescine import atp-binding protein, pota-like | CQW34_03059 | Not Available | Positive | 3764751 - 3766130 | 51348.8 |
| putative putrescine transport system permease protein, poth-like | CQW34_03060 | Not Available | Positive | 3766148 - 3766945 | 29634.9 |
| putative inner membrane abc transporter permease protein, ydcv-like | CQW34_03061 | Not Available | Positive | 3766939 - 3767727 | 28590.9 |
| spermidine/putrescine-binding periplasmic protein precursor | CQW34_03062 | Not Available | Positive | 3767896 - 3769230 | 51091.4 |
| rna recognition motif (rrm, rbd, or rnp domain) | CQW34_03063 | Not Available | Positive | 3769446 - 3769814 | 12901.9 |
| 6-bladed beta-propeller | CQW34_03064 | Not Available | Positive | 3770020 - 3771255 | 46816.9 |
| protein of unknown function (duf4891) | CQW34_03065 | Not Available | Positive | 3771255 - 3771650 | 15115.7 |
| 30s ribosomal protein s16 | CQW34_03066 | Not Available | Negative | 3771765 - 3772310 | 19580.1 |
| malate-2h(+)/na(+)-lactate antiporter | CQW34_03067 | Not Available | Negative | 3772504 - 3773805 | 46438.2 |
| putative rna-splicing ligase, rtcb-like | CQW34_03068 | Not Available | Positive | 3774406 - 3775779 | 50414.1 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



