Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | CQW34_03029 | Not Available | Positive | 3727370 - 3727714 | 13414.2 |
| 30s ribosomal protein s18 | CQW34_03030 | Not Available | Positive | 3727717 - 3727989 | 10660.4 |
| 50s ribosomal protein l9 | CQW34_03031 | Not Available | Positive | 3728001 - 3728444 | 15925.6 |
| hypothetical protein | CQW34_03032 | Not Available | Negative | 3728768 - 3728986 | 7113.42 |
| long-chain-fatty-acid--coa ligase | CQW34_03033 | Not Available | Negative | 3729145 - 3730818 | 63320.4 |
| putative threonylcarbamoyladenosine trna methylthiotransferase, mtab-like | CQW34_03034 | Not Available | Positive | 3731247 - 3732566 | 48720.4 |
| bacterial lipid a biosynthesis acyltransferase | CQW34_03035 | Not Available | Positive | 3732569 - 3733465 | 35658.9 |
| n-acetylglucosaminyl-diphospho-decaprenol l-rhamnosyltransferase | CQW34_03036 | Not Available | Positive | 3733458 - 3734489 | 39124.3 |
| methylglyoxal synthase | CQW34_03037 | Not Available | Positive | 3734494 - 3735012 | 19792.8 |
| putative thiol:disulfide interchange protein, tlpa-like | CQW34_03038 | Not Available | Negative | 3735577 - 3736998 | 54606.4 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



