Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein 41 precursor | CQW34_02949 | Not Available | Positive | 3632254 - 3633390 | 42389.2 |
| fe2+/zn2+ uptake regulation protein | CQW34_02950 | Not Available | Negative | 3633450 - 3633881 | 16134.7 |
| cadmium, zinc and cobalt-transporting atpase | CQW34_02951 | Not Available | Negative | 3633884 - 3635830 | 70833.2 |
| hypothetical protein | CQW34_02952 | Not Available | Negative | 3635948 - 3636982 | 36963.0 |
| putative sensor histidine kinase, rcsc-like | CQW34_02953 | Not Available | Negative | 3637147 - 3639525 | 91657.1 |
| arylsulfatase | CQW34_02954 | Not Available | Positive | 3639764 - 3641293 | 57324.7 |
| thioredoxin-like protein | CQW34_02955 | Not Available | Negative | 3641411 - 3641734 | 12728.4 |
| putative trmh family trna/rrna methyltransferase | CQW34_02956 | Not Available | Negative | 3641910 - 3642722 | 29345.6 |
| putative zinc-type alcohol dehydrogenase-like protein, yjmd-like | CQW34_02957 | Not Available | Negative | 3642802 - 3643842 | 38199.0 |
| cyclic nucleotide-binding domain protein | CQW34_02958 | Not Available | Positive | 3644125 - 3644694 | 22401.2 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



