Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CQW34_02909 | Not Available | Positive | 3583811 - 3584074 | 10025.9 |
| hypothetical protein | CQW34_02910 | Not Available | Positive | 3584086 - 3584688 | 24072.5 |
| Trna-ser | Not Available | Not Available | Positive | 3585311 - 3585398 | Not Available |
| formate acetyltransferase | CQW34_02912 | Not Available | Positive | 3585653 - 3587881 | 83781.0 |
| pyruvate formate-lyase 1-activating enzyme | CQW34_02913 | Not Available | Positive | 3587886 - 3588611 | 27507.9 |
| outer membrane protein beta-barrel domain protein | CQW34_02914 | Not Available | Negative | 3588843 - 3590102 | 46171.2 |
| putative rna polymerase sigma factor, ylac-like | CQW34_02915 | Not Available | Negative | 3590157 - 3590705 | 21045.1 |
| nigd-like c-terminal beta sandwich domain protein | CQW34_02916 | Not Available | Positive | 3590893 - 3591645 | 28085.5 |
| putative hydrogen peroxide-inducible activator | CQW34_02917 | Not Available | Negative | 3591750 - 3592748 | 38006.1 |
| dna protection during starvation protein | CQW34_02918 | Not Available | Positive | 3592818 - 3593291 | 17892.4 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



