Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tyrosine recombinase, xerc-like | CQW34_02879 | Not Available | Negative | 3553863 - 3554666 | 31467.2 |
| type i restriction modification dna specificity domain protein | CQW34_02880 | Not Available | Positive | 3554759 - 3555319 | 20865.3 |
| ecoki-like type i restriction enzyme specificity protein | CQW34_02881 | Not Available | Negative | 3555314 - 3556450 | 42804.3 |
| plasmid recombination enzyme | CQW34_02882 | Not Available | Negative | 3556575 - 3558122 | 59688.7 |
| hypothetical protein | CQW34_02883 | Not Available | Negative | 3558272 - 3559285 | 38609.7 |
| protein of unknown function (duf3987) | CQW34_02884 | Not Available | Negative | 3559401 - 3560771 | 51660.6 |
| helix-turn-helix domain protein | CQW34_02885 | Not Available | Negative | 3560771 - 3561130 | 14022.8 |
| putative tyrosine recombinase, xerc-like | CQW34_02886 | Not Available | Negative | 3561424 - 3562680 | 48210.4 |
| protein of unknown function duf87 | CQW34_02887 | Not Available | Negative | 3562711 - 3564435 | 63850.7 |
| sir2-like domain protein | CQW34_02888 | Not Available | Negative | 3564439 - 3565464 | 38341.0 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



