Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain protein | CQW34_02869 | Not Available | Negative | 3539923 - 3540276 | 13515.2 |
| putative tyrosine recombinase, xerc-like | CQW34_02870 | Not Available | Negative | 3540591 - 3541853 | 48035.9 |
| helix-turn-helix domain protein | CQW34_02871 | Not Available | Negative | 3541850 - 3542413 | 21727.5 |
| hypothetical protein | CQW34_02872 | Not Available | Positive | 3542966 - 3543721 | 29622.2 |
| type iii restriction enzyme, res subunit | CQW34_02873 | Not Available | Negative | 3543757 - 3546654 | 109636.0 |
| helix-turn-helix protein | CQW34_02874 | Not Available | Positive | 3546756 - 3546962 | 7846.57 |
| type i restriction enzyme r protein | CQW34_02875 | Not Available | Positive | 3547025 - 3549730 | 102481.0 |
| putative type i restriction enzyme m protein | CQW34_02876 | Not Available | Positive | 3549735 - 3551168 | 53722.0 |
| protein of unknown function (duf1016) | CQW34_02877 | Not Available | Positive | 3551174 - 3552334 | 45729.9 |
| ecoki-like type i restriction enzyme specificity protein | CQW34_02878 | Not Available | Positive | 3552396 - 3553832 | 54794.2 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



