Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf4934) | CQW34_02499 | Not Available | Negative | 3091674 - 3092918 | 46954.0 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | CQW34_02500 | Not Available | Negative | 3092941 - 3093765 | 30789.0 |
| replicative dna helicase | CQW34_02501 | Not Available | Positive | 3093943 - 3095490 | 57544.0 |
| l-fucose mutarotase | CQW34_02502 | Not Available | Positive | 3095520 - 3095849 | 13272.0 |
| bifunctional l-fucose-1-p guanylyltransferase/l-fucokinase protein fkp | CQW34_02503 | Not Available | Positive | 3095854 - 3098703 | 105683.0 |
| nusg-like transcription termination factor | CQW34_02504 | Not Available | Positive | 3100086 - 3100604 | 19900.4 |
| transcription anti-terminator antagonist, upxz family | CQW34_02505 | Not Available | Positive | 3100640 - 3101113 | 18041.5 |
| phosphonopyruvate hydrolase | CQW34_02506 | Not Available | Positive | 3101116 - 3102417 | 48095.3 |
| pyruvate dehydrogenase (ubiquinone) | CQW34_02507 | Not Available | Positive | 3102425 - 3103552 | 41364.1 |
| nad-dependent methanol dehydrogenase | CQW34_02508 | Not Available | Positive | 3103554 - 3104675 | 41980.8 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



