Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hlyd family secretion protein | CQW34_02459 | Not Available | Positive | 3045410 - 3046306 | 32763.5 |
| putative abc transporter atp-binding protein, ybhf-like | CQW34_02460 | Not Available | Positive | 3046320 - 3047780 | 54560.6 |
| putative inner membrane transport permease, ybhs-like | CQW34_02461 | Not Available | Positive | 3047784 - 3048884 | 40893.8 |
| putative inner membrane transport permease, ybhr-like | CQW34_02462 | Not Available | Positive | 3048881 - 3049999 | 41751.3 |
| putative autoinducer 2 sensor kinase/phosphatase, luxq-like | CQW34_02463 | Not Available | Positive | 3050133 - 3053201 | 117417.0 |
| acid shock protein | CQW34_02464 | Not Available | Negative | 3053297 - 3053722 | 16320.4 |
| alanine--trna ligase | CQW34_02465 | Not Available | Negative | 3053969 - 3054481 | 19650.5 |
| transglutaminase-like superfamily protein | CQW34_02466 | Not Available | Negative | 3054478 - 3055254 | 29575.7 |
| duf218 domain protein | CQW34_02467 | Not Available | Negative | 3055297 - 3055917 | 23179.4 |
| hypothetical protein | CQW34_02468 | Not Available | Negative | 3055932 - 3056105 | 6692.39 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



