Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine dehydratase alpha chain | CQW34_02429 | Not Available | Negative | 2994209 - 2995495 | 45724.7 |
| glycosyl hydrolases family 43 | CQW34_02430 | Not Available | Positive | 2995671 - 2996798 | 42169.9 |
| putative carbohydrate metabolism domain protein | CQW34_02431 | Not Available | Positive | 2996948 - 2998042 | 40186.6 |
| outer membrane protein beta-barrel domain protein | CQW34_02432 | Not Available | Positive | 2998053 - 2998835 | 29142.9 |
| calycin-like beta-barrel domain protein | CQW34_02433 | Not Available | Negative | 2999185 - 2999583 | 13890.0 |
| protein of unknown function (duf4925) | CQW34_02434 | Not Available | Negative | 2999609 - 3001171 | 55682.4 |
| endonuclease/exonuclease/phosphatase family protein | CQW34_02435 | Not Available | Negative | 3001782 - 3002720 | 35933.8 |
| type i phosphodiesterase / nucleotide pyrophosphatase | CQW34_02436 | Not Available | Negative | 3002799 - 3003722 | 34332.3 |
| pqq-like domain protein | CQW34_02437 | Not Available | Negative | 3003736 - 3006171 | 89240.9 |
| susd family protein | CQW34_02438 | Not Available | Negative | 3006297 - 3008090 | 68220.0 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



