Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative ribosome maturation factor, rimm-like | CQW34_02359 | Not Available | Negative | 2918309 - 2918851 | 20500.1 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | CQW34_02360 | Not Available | Negative | 2918848 - 2920152 | 47300.7 |
| protein of unknown function (duf4290) | CQW34_02361 | Not Available | Negative | 2920200 - 2920817 | 24529.4 |
| putative trna threonylcarbamoyladenosine biosynthesis protein, tsab-like | CQW34_02362 | Not Available | Negative | 2920869 - 2921558 | 25266.6 |
| hypothetical protein | CQW34_02363 | Not Available | Negative | 2922331 - 2922528 | 7337.95 |
| yicc-like family, n-terminal region | CQW34_02364 | Not Available | Positive | 2922562 - 2923461 | 34499.5 |
| guanylate kinase | CQW34_02365 | Not Available | Positive | 2923474 - 2924088 | 22981.4 |
| nicotinate-nucleotide adenylyltransferase | CQW34_02366 | Not Available | Positive | 2924122 - 2924727 | 23387.8 |
| putative metallophosphoesterase | CQW34_02367 | Not Available | Negative | 2924731 - 2925783 | 38679.9 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | CQW34_02368 | Not Available | Positive | 2925883 - 2926779 | 33060.1 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



