Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacterial dna-binding protein | CQW34_02339 | Not Available | Positive | 2899288 - 2899758 | 17061.3 |
| ribose-5-phosphate isomerase a | CQW34_02340 | Not Available | Negative | 2899972 - 2900673 | 26004.7 |
| protein of unknown function (duf3843) | CQW34_02341 | Not Available | Negative | 2900824 - 2901828 | 39182.3 |
| putative n-acyltransferase, ynca-like | CQW34_02342 | Not Available | Positive | 2901901 - 2902434 | 20455.7 |
| helix-turn-helix domain protein | CQW34_02343 | Not Available | Positive | 2902523 - 2902945 | 16242.4 |
| putative metallopeptidase, imma-like | CQW34_02344 | Not Available | Positive | 2902932 - 2903669 | 27893.8 |
| hypothetical protein | CQW34_02345 | Not Available | Positive | 2903632 - 2903865 | 9213.07 |
| hypothetical protein | CQW34_02346 | Not Available | Positive | 2903862 - 2904155 | 11339.7 |
| putative holliday junction atp-dependent dna helicase, ruva-like | CQW34_02347 | Not Available | Negative | 2904292 - 2904897 | 21202.1 |
| meso-diaminopimelate d-dehydrogenase | CQW34_02348 | Not Available | Positive | 2905032 - 2905955 | 33287.5 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



