Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 7-cyano-7-deazaguanine reductase | CQW34_02289 | Not Available | Positive | 2842824 - 2843279 | 17709.2 |
| ribosomal rna large subunit methyltransferase h | CQW34_02290 | Not Available | Negative | 2843289 - 2843762 | 18225.3 |
| protein of unknown function (duf4783) | CQW34_02291 | Not Available | Positive | 2843859 - 2844251 | 14647.6 |
| putative nicotinate-nucleotide pyrophosphorylase (carboxylating) | CQW34_02292 | Not Available | Positive | 2844244 - 2845083 | 30777.7 |
| putative rna polymerase sigma factor, ylac-like | CQW34_02293 | Not Available | Positive | 2845354 - 2845905 | 21256.5 |
| outer membrane protein beta-barrel domain protein | CQW34_02294 | Not Available | Positive | 2845889 - 2846929 | 37624.7 |
| protein of unknown function (duf4943) | CQW34_02295 | Not Available | Positive | 2846966 - 2847478 | 19652.4 |
| protein of unknown function (duf4858) | CQW34_02296 | Not Available | Positive | 2847492 - 2848196 | 26588.3 |
| nitronate monooxygenase | CQW34_02297 | Not Available | Positive | 2848254 - 2849198 | 33915.0 |
| alanine dehydrogenase | CQW34_02298 | Not Available | Negative | 2849294 - 2850403 | 39705.5 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



