Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf2400) | CQW34_02129 | Not Available | Positive | 2664114 - 2664848 | 28278.9 |
| proline--trna ligase | CQW34_02130 | Not Available | Positive | 2665143 - 2666636 | 56957.1 |
| putative inner membrane protein, yccf-like | CQW34_02131 | Not Available | Positive | 2666729 - 2667109 | 13762.7 |
| tamb, inner membrane protein subunit of tam complex | CQW34_02132 | Not Available | Negative | 2667205 - 2671809 | 173485.0 |
| trna n6-adenosine threonylcarbamoyltransferase | CQW34_02133 | Not Available | Positive | 2671842 - 2672861 | 36958.2 |
| putative nicotinamide-nucleotide amidohydrolase, pncc-like | CQW34_02134 | Not Available | Positive | 2672869 - 2674101 | 44610.3 |
| 50s ribosomal protein l28 | CQW34_02135 | Not Available | Positive | 2674223 - 2674483 | 9701.95 |
| 50s ribosomal protein l33 2 | CQW34_02136 | Not Available | Positive | 2674510 - 2674698 | 7211.91 |
| protein of unknown function (duf4295) | CQW34_02137 | Not Available | Positive | 2674718 - 2674876 | 5921.26 |
| putative signal recognition particle receptor, ftsy-like | CQW34_02138 | Not Available | Positive | 2675026 - 2675985 | 34602.7 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



