Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CQW34_02119 | Not Available | Negative | 2652623 - 2653414 | 30041.4 |
| cobyric acid synthase | CQW34_02120 | Not Available | Positive | 2654032 - 2655519 | 55064.2 |
| threonine-phosphate decarboxylase | CQW34_02121 | Not Available | Positive | 2655512 - 2656525 | 37695.3 |
| cobd/cbib protein | CQW34_02122 | Not Available | Positive | 2656561 - 2657517 | 35781.2 |
| phosphoserine phosphatase 1 | CQW34_02123 | Not Available | Negative | 2657495 - 2658040 | 20585.4 |
| cobalamin synthase | CQW34_02124 | Not Available | Negative | 2658043 - 2658786 | 27524.7 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | CQW34_02125 | Not Available | Negative | 2658799 - 2659836 | 37889.0 |
| putative bifunctional adenosylcobalamin biosynthesis protein, cobp-like | CQW34_02126 | Not Available | Negative | 2659859 - 2660458 | 22849.3 |
| Trna-gly | Not Available | Not Available | Positive | 2660523 - 2660598 | Not Available |
| putative tricorn protease | CQW34_02128 | Not Available | Positive | 2660749 - 2663982 | 120125.0 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



