Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CQW34_02109 | Not Available | Positive | 2640900 - 2641634 | 28325.7 |
| cobyrinic acid a,c-diamide synthase | CQW34_02110 | Not Available | Positive | 2641706 - 2643040 | 49972.1 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | CQW34_02111 | Not Available | Positive | 2643040 - 2643612 | 21838.2 |
| putative autoinducer 2 sensor kinase/phosphatase, luxq-like | CQW34_02112 | Not Available | Positive | 2643723 - 2646161 | 93220.1 |
| abc-2 family transporter protein | CQW34_02113 | Not Available | Negative | 2646124 - 2647314 | 44246.4 |
| putative inner membrane transport permease, ybhr-like | CQW34_02114 | Not Available | Negative | 2647298 - 2648470 | 43691.1 |
| putative multidrug export protein, emra-like | CQW34_02115 | Not Available | Negative | 2648614 - 2649612 | 36550.2 |
| outer membrane efflux protein | CQW34_02116 | Not Available | Negative | 2649643 - 2651136 | 55564.3 |
| pare-like toxin of type ii toxin-antitoxin system | CQW34_02117 | Not Available | Negative | 2651219 - 2651542 | 12673.6 |
| hypothetical protein | CQW34_02118 | Not Available | Negative | 2651539 - 2651886 | 13348.9 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



