Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase b | CQW34_02039 | Not Available | Positive | 2550968 - 2552368 | 53904.5 |
| asparagine--trna ligase | CQW34_02040 | Not Available | Positive | 2552475 - 2553878 | 53491.2 |
| protein of unknown function (duf4488) | CQW34_02041 | Not Available | Positive | 2554036 - 2554524 | 18684.5 |
| hypothetical protein | CQW34_02042 | Not Available | Negative | 2554544 - 2554840 | 11437.9 |
| 50s ribosomal protein l13 | CQW34_02043 | Not Available | Positive | 2554859 - 2555320 | 17013.7 |
| 30s ribosomal protein s9 | CQW34_02044 | Not Available | Positive | 2555327 - 2555713 | 14418.7 |
| 30s ribosomal protein s2 | CQW34_02045 | Not Available | Positive | 2555834 - 2556670 | 30527.0 |
| elongation factor ts | CQW34_02046 | Not Available | Positive | 2556794 - 2557786 | 36016.7 |
| translation initiation factor sui1 | CQW34_02047 | Not Available | Negative | 2557977 - 2558327 | 12954.4 |
| rex-like redox-sensing transcriptional repressor | CQW34_02048 | Not Available | Positive | 2558504 - 2559166 | 24531.7 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



