Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pd-(d/e)xk nuclease superfamily protein | CQW34_01779 | Not Available | Negative | 2195684 - 2196055 | 13900.3 |
| putative rada-like dna repair protein | CQW34_01780 | Not Available | Negative | 2196111 - 2197478 | 50246.0 |
| l-asparaginase 1 | CQW34_01781 | Not Available | Negative | 2198136 - 2199185 | 39052.8 |
| bifunctional aspartokinase/homoserine dehydrogenase 1 | CQW34_01782 | Not Available | Positive | 2199679 - 2202114 | 88840.7 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | CQW34_01783 | Not Available | Positive | 2202126 - 2203337 | 44784.7 |
| threonine synthase | CQW34_01784 | Not Available | Positive | 2203484 - 2204785 | 47860.4 |
| eama-like transporter family protein | CQW34_01785 | Not Available | Positive | 2205212 - 2206162 | 34259.2 |
| thiamine pyrophosphokinase, catalytic domain | CQW34_01786 | Not Available | Negative | 2206116 - 2206739 | 23022.2 |
| putative nicotinamide riboside transporter, pnuc-like | CQW34_01787 | Not Available | Negative | 2206726 - 2207298 | 22353.8 |
| putative tonb dependent receptor protein | CQW34_01788 | Not Available | Negative | 2207302 - 2209521 | 84029.0 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



