Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthosine permease | CQW34_01669 | Not Available | Positive | 2055238 - 2056470 | 45309.9 |
| bifunctional nuclease | CQW34_01670 | Not Available | Positive | 2056473 - 2057042 | 21284.5 |
| ribosomal rna small subunit methyltransferase e | CQW34_01671 | Not Available | Positive | 2057048 - 2057737 | 26154.6 |
| protein of unknown function (duf4836) | CQW34_01672 | Not Available | Positive | 2057765 - 2059318 | 57001.6 |
| putative abc transporter atp-binding protein | CQW34_01673 | Not Available | Positive | 2059331 - 2059975 | 24479.5 |
| hypothetical protein | CQW34_01674 | Not Available | Positive | 2059972 - 2061177 | 45056.5 |
| trna dimethylallyltransferase | CQW34_01675 | Not Available | Positive | 2061397 - 2062317 | 35379.6 |
| putative lipid kinase, bmru-like | CQW34_01676 | Not Available | Positive | 2062609 - 2063535 | 34944.5 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | CQW34_01677 | Not Available | Positive | 2063551 - 2064354 | 29075.5 |
| protease 3 precursor | CQW34_01678 | Not Available | Positive | 2064503 - 2067322 | 106548.0 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



