Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function (duf4974) | CQW34_01639 | Not Available | Negative | 2013271 - 2014278 | 38722.4 |
| putative ecf rna polymerase sigma factor, sigw-like | CQW34_01640 | Not Available | Positive | 2014414 - 2014989 | 22997.0 |
| calcineurin-like phosphoesterase | CQW34_01641 | Not Available | Negative | 2015192 - 2016265 | 40719.5 |
| endonuclease/exonuclease/phosphatase family protein | CQW34_01642 | Not Available | Negative | 2016350 - 2017378 | 38823.3 |
| starch-binding associating with outer membrane | CQW34_01643 | Not Available | Negative | 2017457 - 2018977 | 57297.7 |
| carboxypeptidase regulatory-like domain protein | CQW34_01644 | Not Available | Negative | 2018991 - 2022293 | 123194.0 |
| protein of unknown function (duf4974) | CQW34_01645 | Not Available | Negative | 2022550 - 2023575 | 39244.8 |
| putative ecf rna polymerase sigma factor, rpoe-like | CQW34_01646 | Not Available | Positive | 2023641 - 2024261 | 24408.4 |
| bacterial dna-binding protein | CQW34_01647 | Not Available | Positive | 2024471 - 2024899 | 16025.1 |
| putative sensory/regulatory protein, rpfc-like | CQW34_01648 | Not Available | Negative | 2024865 - 2026766 | 72137.0 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



