Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ga3 t6ss effector protein bfe1 | CQW34_01539 | Not Available | Negative | 1903230 - 1904225 | 36731.6 |
| ga3 t6ss tssd (hcp) protein | CQW34_01540 | Not Available | Negative | 1904238 - 1904642 | 15010.0 |
| ga3 t6ss tssd (hcp) protein | CQW34_01541 | Not Available | Negative | 1904648 - 1905076 | 15781.7 |
| ga3 t6ss tssh (clpv) protein | CQW34_01542 | Not Available | Negative | 1905092 - 1907575 | 91359.1 |
| ga3 t6ss tssc protein | CQW34_01543 | Not Available | Negative | 1907588 - 1908967 | 52173.0 |
| ga3 t6ss tssb protein | CQW34_01544 | Not Available | Negative | 1908984 - 1909433 | 16692.7 |
| ga3 t6ss tssd (hcp) protein | CQW34_01545 | Not Available | Negative | 1909522 - 1909911 | 14490.1 |
| hypothetical protein | CQW34_01546 | Not Available | Negative | 1910352 - 1911095 | 28538.6 |
| 8-amino-7-oxononanoate synthase | CQW34_01547 | Not Available | Positive | 1911440 - 1912711 | 46561.5 |
| helix-turn-helix domain protein | CQW34_01548 | Not Available | Positive | 1913378 - 1913710 | 13101.8 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



