Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | CQW34_01499 | Not Available | Negative | 1852055 - 1852624 | 21253.5 |
| carboxymuconolactone decarboxylase family protein | CQW34_01500 | Not Available | Negative | 1852638 - 1853405 | 28504.5 |
| putative acetyltransferase | CQW34_01501 | Not Available | Negative | 1853494 - 1854057 | 20683.9 |
| peptidase family s41 | CQW34_01502 | Not Available | Positive | 1854256 - 1855533 | 47653.9 |
| protein of unknown function (duf3795) | CQW34_01503 | Not Available | Positive | 1856558 - 1856893 | 12395.8 |
| protoporphyrinogen oxidase | CQW34_01504 | Not Available | Negative | 1857072 - 1858460 | 50942.3 |
| oxygen-independent coproporphyrinogen-iii oxidase | CQW34_01505 | Not Available | Negative | 1858463 - 1859827 | 51573.9 |
| major facilitator superfamily protein | CQW34_01506 | Not Available | Negative | 1859833 - 1861071 | 46214.3 |
| pesticin receptor precursor | CQW34_01507 | Not Available | Negative | 1861081 - 1863150 | 78923.6 |
| collagen triple helix repeat (20 copies) | CQW34_01508 | Not Available | Positive | 1863621 - 1865912 | 83149.9 |
Pathways
898 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



