Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Bacteroides |
| Species | Bacteroides fragilis |
| Strain | strain 12905 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Metazoa |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1517870 bp
Thymine Count
1567793 bp
Guanine Count
1203986 bp
Cytosine Count
1145244 bp
Genome Length
5436953 bp
Protein-coding Genes
4392 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylacetate decarboxylase large subunit | CQW34_00089 | Not Available | Negative | 131689 - 133758 | 79225.5 |
| 4-hydroxyphenylacetate decarboxylase activating enzyme | CQW34_00090 | Not Available | Negative | 133755 - 134540 | 29466.8 |
| putative sensor histidine kinase, tods-like | CQW34_00091 | Not Available | Negative | 134739 - 138767 | 153891.0 |
| putative tonb dependent receptor protein | CQW34_00092 | Not Available | Positive | 139087 - 142257 | 117331.0 |
| susd family protein | CQW34_00093 | Not Available | Positive | 142270 - 144249 | 74661.0 |
| hypothetical protein | CQW34_00094 | Not Available | Positive | 144268 - 145575 | 49298.4 |
| hypothetical protein | CQW34_00095 | Not Available | Positive | 145727 - 148474 | 106214.0 |
| non-reducing end beta-l-arabinofuranosidase | CQW34_00096 | Not Available | Positive | 148476 - 150938 | 91056.4 |
| Trna-asn | Not Available | Not Available | Positive | 151052 - 151128 | Not Available |
| Trna-asn | Not Available | Not Available | Positive | 151158 - 151231 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Ad pathologies | Causes | PMC10482867 |
| Diarrhea | Causes | PMC13367044 |
| Colitis | Causes | PMC13367044 |
| Tumor formation | Causes | PMC13367044 |
| Anaerobic bacteremia | Causes | PMC5704556 |
| Intraabdominal abscesses | Causes | PMC5704556 |
| Colorectal cancer | Causes | PMC11704243 |
| Crc | Causes | PMC11704243 |
| Bacteremia | Causes | PMC8554563 |
| Septicemia | Causes | PMC8554563 |



