Bacteroides fragilis strain CM13

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides fragilis strain CM13 is a Gram-negative, rod-shaped bacterium that typically exists as single cells and is classified as an anaerobic chemoorganotroph. This organism thrives in host-associated environments, suggesting a symbiotic relationship with its host. Optimal growth conditions for strain CM13 are observed at 37.0°C, which is consistent with the physiological temperature of warm-blooded animals, including humans. As an anaerobe, Bacteroides fragilis strain CM13 plays a crucial role in the gut microbiome, contributing to the fermentation of complex carbohydrates and the maintenance of gut health. Its ability to metabolize various organic substrates allows it to compete effectively within the microbial community of the gastrointestinal tract. The ecological significance of Bacteroides fragilis strain CM13 extends beyond its metabolic capabilities; it is involved in various biochemical processes that may influence host metabolism and immune responses. Thus, while this strain resides in an anaerobic niche, its interactions with the host and other microbial inhabitants can have profound implications for gut homeostasis and overall health. Understanding these dynamics is essential for appreciating the complex relationships within the microbiome and their potential effects on host physiology.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides fragilis
Strainstrain CM13

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Bacteroides fragilis strain CM13
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityHuman

Genome Summary

Bacteroides fragilis strain CM13


Gene Summary

Adenine Count

1515001 bp

Thymine Count

1445887 bp

Guanine Count

1091691 bp

Cytosine Count

1153952 bp

Genome Length

5208842 bp

Protein-coding Genes

4222 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
tetratricopeptide repeat proteinCQW35_00001Not Available+258 - 99527458.6
aminodeoxychorismate synthase component 1CQW35_00002Not Available+1113 - 209637323.8
amino-transferase class ivCQW35_00003Not Available+2080 - 267623478.5
conserved hypothetical protein (duf2461)CQW35_00004Not Available+2964 - 363226241.9
putative 1,4-alpha-glucan branching enzyme, glgb-likeCQW35_00005Not Available+3701 - 571377607.0
alpha-amylase 2CQW35_00006Not Available-5789 - 748665272.9
putative oxidoreductase, yvaa-likeCQW35_00007Not Available-7497 - 855539754.6
putative nte family protein, rssa-likeCQW35_00008Not Available-8546 - 934629642.9
fosmidomycin resistance proteinCQW35_00009Not Available-9522 - 1073644223.6
glutamine synthetaseCQW35_00010Not Available+10954 - 1245956046.9

Displaying genes 1 – 10 of 4222 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites