Bifidobacterium xylocopae strain XV2

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium xylocopae strain XV2 is characterized as a rod-shaped bacterium, which is notable within the Bifidobacterium genus. This strain possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in growth and reproduction. Additionally, the presence of flagella suggests that Bifidobacterium xylocopae strain XV2 has the capability for motility, potentially enhancing its ability to colonize different environments or interact with various substrates. The accession number PDCH00000000.1 provides a reference for genomic information associated with this strain, facilitating further research and analysis. The motility conferred by flagella may play a crucial role in the ecological niches occupied by Bifidobacterium xylocopae, possibly allowing it to navigate through complex microbial communities or environments where it can establish beneficial interactions. Understanding the traits of Bifidobacterium xylocopae strain XV2 not only sheds light on its biological characteristics but also suggests ecological implications, particularly in relation to its role in microbiomes. The motility and rod shape may influence how this bacterium interacts with other microorganisms, contributing to the dynamics of microbial populations and their overall function in specific ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium xylocopae
Strainstrain XV2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium xylocopae strain XV2 ctg_98, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration dna helicase ruvbCRD59_04465Not AvailableNegative1062035 - 106309938469.4
holliday junction branch migration protein ruvaCRD59_04470Not AvailableNegative1063099 - 106371021438.1
crossover junction endodeoxyribonuclease ruvcCRD59_04475Not AvailableNegative1063776 - 106435720842.2
yebc/pmpr family dna-binding transcriptional regulatorCRD59_04480Not AvailableNegative1064364 - 106511926687.9
glycosyl transferaseCRD59_04485Not AvailableNegative1065249 - 106646344020.6
phosphatidylinositol mannoside acyltransferaseCRD59_04490Not AvailableNegative1066447 - 106745738144.0
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseCRD59_04495Not AvailableNegative1067464 - 106813523433.8
threonine--trna ligaseCRD59_04500Not AvailableNegative1068215 - 107025776414.5
pac2 family proteinCRD59_04505Not AvailableNegative1070359 - 107121031452.8
Trna-valNot AvailableNot AvailablePositive1071732 - 1071804Not Available

Displaying genes 881 – 890 of 1514 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.