Bifidobacterium xylocopae strain XV2

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium xylocopae strain XV2 is characterized as a rod-shaped bacterium, which is notable within the Bifidobacterium genus. This strain possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in growth and reproduction. Additionally, the presence of flagella suggests that Bifidobacterium xylocopae strain XV2 has the capability for motility, potentially enhancing its ability to colonize different environments or interact with various substrates. The accession number PDCH00000000.1 provides a reference for genomic information associated with this strain, facilitating further research and analysis. The motility conferred by flagella may play a crucial role in the ecological niches occupied by Bifidobacterium xylocopae, possibly allowing it to navigate through complex microbial communities or environments where it can establish beneficial interactions. Understanding the traits of Bifidobacterium xylocopae strain XV2 not only sheds light on its biological characteristics but also suggests ecological implications, particularly in relation to its role in microbiomes. The motility and rod shape may influence how this bacterium interacts with other microorganisms, contributing to the dynamics of microbial populations and their overall function in specific ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium xylocopae
Strainstrain XV2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium xylocopae strain XV2 ctg_98, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
laci family transcriptional regulatorCRD59_02870Not AvailableNegative681172 - 68218536456.4
abc transporter permeaseCRD59_02875Not AvailablePositive682399 - 68332834486.4
abc transporter permeaseCRD59_02880Not AvailablePositive683325 - 68433236612.9
beta-galactosidaseCRD59_02885Not AvailablePositive684366 - 68647178874.0
abc transporter substrate-binding proteinCRD59_02890Not AvailablePositive686743 - 68808647812.9
abc transporter substrate-binding proteinCRD59_02895Not AvailablePositive688388 - 68973748379.1
sugar abc transporter atp-binding proteinCRD59_02900Not AvailablePositive689958 - 69108540870.2
lipopolysaccharide kinaseCRD59_02905Not AvailablePositive691285 - 69280857287.4
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbCRD59_02910Not AvailableNegative692918 - 69391634845.8
gamma-carboxymuconolactone decarboxylaseCRD59_02915Not AvailableNegative694006 - 69477027229.9

Displaying genes 571 – 580 of 1514 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.