Bifidobacterium xylocopae strain XV2

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Bifidobacteriales

Family

Bifidobacteriaceae

Genus

Bifidobacterium

Description

Bifidobacterium xylocopae strain XV2 is characterized as a rod-shaped bacterium, which is notable within the Bifidobacterium genus. This strain possesses a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in growth and reproduction. Additionally, the presence of flagella suggests that Bifidobacterium xylocopae strain XV2 has the capability for motility, potentially enhancing its ability to colonize different environments or interact with various substrates. The accession number PDCH00000000.1 provides a reference for genomic information associated with this strain, facilitating further research and analysis. The motility conferred by flagella may play a crucial role in the ecological niches occupied by Bifidobacterium xylocopae, possibly allowing it to navigate through complex microbial communities or environments where it can establish beneficial interactions. Understanding the traits of Bifidobacterium xylocopae strain XV2 not only sheds light on its biological characteristics but also suggests ecological implications, particularly in relation to its role in microbiomes. The motility and rod shape may influence how this bacterium interacts with other microorganisms, contributing to the dynamics of microbial populations and their overall function in specific ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderBifidobacteriales
FamilyBifidobacteriaceae
GenusBifidobacterium
SpeciesBifidobacterium xylocopae
Strainstrain XV2

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bifidobacterium xylocopae strain XV2 ctg_98, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter atp-binding proteinCRD59_05070Not AvailablePositive1211601 - 121301051795.8
cys-trna(pro) deacylaseCRD59_05075Not AvailablePositive1213633 - 121414217817.3
aldose epimeraseCRD59_05080Not AvailablePositive1214358 - 121531135149.8
dna polymerase iii subunit epsilonCRD59_05095Not AvailablePositive1216887 - 121764227779.6
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseCRD59_05100Not AvailablePositive1217761 - 121935958229.0
carboxylate--amine ligaseCRD59_05105Not AvailablePositive1219365 - 122060647591.9
aspartate racemaseCRD59_05110Not AvailablePositive1220603 - 122131926606.8
chromosome segregation protein smcCRD59_05115Not AvailableNegative1221383 - 1225087135337.0
dihydrofolate synthaseCRD59_05120Not AvailableNegative1225087 - 122650851450.4
xaa-pro aminopeptidaseCRD59_05125Not AvailablePositive1226731 - 122832659039.1

Displaying genes 1001 – 1010 of 1514 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.