Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-rhamnosyltransferase | BCF11_0750 | Not Available | Negative | 855676 - 857076 | 54317.5 |
| lipopolysaccharide transport system atp-binding protein | BCF11_0751 | Not Available | Negative | 857073 - 858329 | 46279.6 |
| lipopolysaccharide transport system permease protein | BCF11_0752 | Not Available | Negative | 858329 - 859159 | 31171.3 |
| mannose-1-phosphate guanylyltransferase | BCF11_0753 | Not Available | Negative | 859159 - 860640 | 54066.8 |
| gdpmannose 4,6-dehydratase | BCF11_0754 | Not Available | Negative | 860653 - 861630 | 36595.1 |
| gdp-4-dehydro-6-deoxy-d-mannose reductase | BCF11_0755 | Not Available | Negative | 861671 - 862612 | 34519.2 |
| methyltransferase family protein | BCF11_0756 | Not Available | Negative | 862665 - 863507 | 31060.1 |
| peptidoglycan/lps o-acetylase oafa/yrhl | BCF11_0757 | Not Available | Negative | 863509 - 864702 | 46077.4 |
| methyltransferase family protein | BCF11_0758 | Not Available | Negative | 864717 - 865601 | 31530.0 |
| hypothetical protein | BCF11_0759 | Not Available | Negative | 865598 - 866923 | 49795.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
