Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative mfs family arabinose efflux permease | BCF11_0720 | Not Available | Positive | 820334 - 821662 | 45546.2 |
| choline dehydrogenase | BCF11_0721 | Not Available | Negative | 821909 - 823579 | 61442.8 |
| betaine-aldehyde dehydrogenase | BCF11_0722 | Not Available | Negative | 823640 - 825112 | 52942.3 |
| tetr family transcriptional regulator | BCF11_0723 | Not Available | Negative | 825154 - 825747 | 21796.1 |
| choline/glycine/proline betaine transport protein | BCF11_0724 | Not Available | Positive | 826022 - 827605 | 56750.0 |
| uracil-xanthine permease | BCF11_0725 | Not Available | Negative | 827680 - 828975 | 44352.6 |
| hypothetical protein | BCF11_0726 | Not Available | Negative | 829210 - 829728 | 18826.4 |
| heme-degrading monooxygenase hmoa | BCF11_0727 | Not Available | Positive | 829877 - 830179 | 11382.6 |
| uncharacterized protein duf3563 | BCF11_0728 | Not Available | Negative | 830409 - 830687 | 10058.9 |
| exodeoxyribonuclease i subunit c | BCF11_0729 | Not Available | Positive | 830857 - 832365 | 56930.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
