Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system protein impa | BCF11_0639 | Not Available | Positive | 714593 - 715708 | 40847.6 |
| oop family ompa-ompf porin | BCF11_0640 | Not Available | Negative | 715751 - 716533 | 27889.2 |
| type vi secretion system protein impm | BCF11_0641 | Not Available | Negative | 716537 - 717523 | 36174.6 |
| type vi secretion system protein impl | BCF11_0642 | Not Available | Negative | 717520 - 721482 | 143827.0 |
| peptidoglycan l-alanyl-d-glutamate endopeptidase cwlk | BCF11_0643 | Not Available | Negative | 721700 - 722479 | 29270.6 |
| hypothetical protein | BCF11_0644 | Not Available | Positive | 722690 - 723613 | 31450.0 |
| k(+)-stimulated pyrophosphate-energized sodium pump | BCF11_0645 | Not Available | Negative | 724503 - 726968 | 83622.0 |
| adenylate kinase | BCF11_0646 | Not Available | Negative | 727237 - 727893 | 23618.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | BCF11_0647 | Not Available | Negative | 728098 - 728862 | 26940.4 |
| hypothetical protein | BCF11_0648 | Not Available | Negative | 728878 - 729072 | 6823.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
