Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| barstar (barnase inhibitor) | BCF11_0619 | Not Available | Negative | 688582 - 688980 | 15109.1 |
| ribonuclease t1 | BCF11_0620 | Not Available | Negative | 689041 - 689463 | 15846.9 |
| nte family protein | BCF11_0621 | Not Available | Negative | 689581 - 690789 | 43508.4 |
| type vi secretion system protein impk | BCF11_0622 | Not Available | Negative | 690939 - 691730 | 28865.7 |
| type vi secretion system protein impj | BCF11_0623 | Not Available | Negative | 691727 - 693073 | 50015.7 |
| type vi secretion system protein vasd | BCF11_0624 | Not Available | Negative | 693132 - 693737 | 20950.4 |
| tetratricopeptide repeat protein | BCF11_0625 | Not Available | Positive | 694002 - 694589 | 20335.3 |
| type vi secretion system protein impb | BCF11_0626 | Not Available | Positive | 694663 - 695172 | 19016.8 |
| type vi secretion system protein impc | BCF11_0627 | Not Available | Positive | 695174 - 696661 | 54873.6 |
| type vi secretion system secreted protein hcp | BCF11_0628 | Not Available | Positive | 696686 - 697177 | 17696.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
