Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid transport system permease protein | BCF11_0609 | Not Available | Negative | 679234 - 680163 | 32427.3 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | BCF11_0610 | Not Available | Negative | 680759 - 681691 | 33527.3 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slpa | BCF11_0611 | Not Available | Negative | 681717 - 682172 | 16532.8 |
| dna repair protein radc | BCF11_0612 | Not Available | Positive | 682271 - 682945 | 24435.4 |
| lsu ribosomal protein l28p | BCF11_0613 | Not Available | Positive | 683082 - 683318 | 8786.76 |
| large subunit ribosomal protein l33 | BCF11_0614 | Not Available | Positive | 683341 - 683508 | 6402.85 |
| stearoyl-coa desaturase (delta-9 desaturase) | BCF11_0615 | Not Available | Negative | 683715 - 684908 | 45304.7 |
| mechanosensitive ion channel-like protein | BCF11_0616 | Not Available | Negative | 685043 - 686413 | 50464.1 |
| 16s rrna (cytosine967-c5)-methyltransferase | BCF11_0617 | Not Available | Negative | 686508 - 687761 | 45626.5 |
| phosphoribosylglycinamide formyltransferase-1 | BCF11_0618 | Not Available | Negative | 687910 - 688533 | 22564.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
