Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCF11_0489 | Not Available | Negative | 529680 - 530720 | 35147.0 |
| hypothetical protein | BCF11_0490 | Not Available | Negative | 531303 - 536822 | 190645.0 |
| trmh family rna methyltransferase | BCF11_0491 | Not Available | Negative | 537521 - 538306 | 27545.1 |
| rnase hii | BCF11_0492 | Not Available | Negative | 538306 - 538932 | 22453.3 |
| lipid-a-disaccharide synthase | BCF11_0493 | Not Available | Negative | 538976 - 540148 | 42835.3 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | BCF11_0494 | Not Available | Negative | 540150 - 540938 | 28025.5 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | BCF11_0495 | Not Available | Negative | 540943 - 541458 | 18799.7 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | BCF11_0496 | Not Available | Negative | 541451 - 542518 | 36697.6 |
| outer membrane protein | BCF11_0497 | Not Available | Negative | 542544 - 543071 | 19709.5 |
| beta-barrel assembly machine subunit bama | BCF11_0498 | Not Available | Negative | 543155 - 545551 | 88978.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
