Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCF11_5458 | Not Available | Positive | 5921830 - 5922750 | 32421.2 |
| rimj/riml family protein n-acetyltransferase | BCF11_5459 | Not Available | Negative | 5922799 - 5923308 | 18702.7 |
| thij/pfpi family protein | BCF11_5460 | Not Available | Positive | 5923435 - 5924331 | 32173.4 |
| putative pin family toxin of toxin-antitoxin system | BCF11_5461 | Not Available | Positive | 5924362 - 5924856 | 18335.2 |
| methionine aminotransferase | BCF11_5462 | Not Available | Positive | 5924966 - 5926156 | 43024.6 |
| gst-like protein | BCF11_5463 | Not Available | Positive | 5926208 - 5926900 | 26136.2 |
| transcription elongation factor greb | BCF11_5464 | Not Available | Negative | 5926922 - 5927485 | 20949.8 |
| hypothetical protein | BCF11_5465 | Not Available | Positive | 5927606 - 5928541 | 34163.2 |
| type 1 fimbria pilin | BCF11_5466 | Not Available | Negative | 5928569 - 5929594 | 35002.8 |
| type 1 fimbria pilin | BCF11_5467 | Not Available | Negative | 5929660 - 5930676 | 34545.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
