Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | BCF11_5365 | Not Available | Negative | 5831234 - 5832112 | 31043.9 |
| methyltransferase family protein | BCF11_5366 | Not Available | Negative | 5832242 - 5832832 | 20809.9 |
| tryptophanyl-trna synthetase | BCF11_5367 | Not Available | Negative | 5832840 - 5834042 | 45163.0 |
| zn-dependent protease | BCF11_5368 | Not Available | Negative | 5834054 - 5834728 | 24968.3 |
| trna threonylcarbamoyl adenosine modification protein (sua5/ycio/yrdc/ywlc family) | BCF11_5369 | Not Available | Negative | 5834864 - 5835487 | 22874.7 |
| heat shock protein htpx | BCF11_5370 | Not Available | Negative | 5835555 - 5836439 | 31151.6 |
| glutathione s-transferase | BCF11_5371 | Not Available | Negative | 5836691 - 5837344 | 24692.9 |
| putative acyltransferase | BCF11_5372 | Not Available | Positive | 5837468 - 5838532 | 38547.0 |
| cytochrome c oxidase subunit iv | BCF11_5373 | Not Available | Negative | 5838536 - 5838850 | 12079.5 |
| cytochrome c oxidase subunit 3 | BCF11_5374 | Not Available | Negative | 5838859 - 5839575 | 26423.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
