Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase inso family protein | BCF11_5171 | Not Available | Negative | 5611569 - 5612459 | 34658.3 |
| transposase | BCF11_5172 | Not Available | Negative | 5612456 - 5612746 | 10632.9 |
| hypothetical protein | BCF11_5173 | Not Available | Negative | 5614477 - 5615112 | 24023.8 |
| Trna-ser | Not Available | Not Available | Positive | 5615529 - 5615618 | Not Available |
| oxygen-independent coproporphyrinogen-3 oxidase | BCF11_5175 | Not Available | Negative | 5615711 - 5616967 | 46232.2 |
| xtp/ditp diphosphohydrolase | BCF11_5176 | Not Available | Negative | 5616964 - 5617548 | 20908.6 |
| phosphinothricin acetyltransferase | BCF11_5177 | Not Available | Negative | 5617647 - 5618159 | 18978.5 |
| type iv pilus assembly protein pilz | BCF11_5178 | Not Available | Negative | 5618181 - 5618561 | 13762.5 |
| dna polymerase-3 subunit delta' | BCF11_5179 | Not Available | Negative | 5618582 - 5619625 | 38449.9 |
| dtmp kinase | BCF11_5180 | Not Available | Negative | 5619654 - 5620283 | 23260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
