Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine38-40 synthase | BCF11_5108 | Not Available | Negative | 5545372 - 5546181 | 30349.4 |
| pilus assembly protein fimv | BCF11_5109 | Not Available | Negative | 5546301 - 5549276 | 100734.0 |
| aspartate-semialdehyde dehydrogenase | BCF11_5110 | Not Available | Negative | 5549528 - 5550664 | 41134.0 |
| 3-isopropylmalate dehydrogenase | BCF11_5111 | Not Available | Negative | 5550733 - 5551803 | 38237.1 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase small subunit | BCF11_5112 | Not Available | Negative | 5551932 - 5552579 | 24517.3 |
| entericidin a | BCF11_5113 | Not Available | Negative | 5552636 - 5552761 | 4525.7 |
| 3-isopropylmalate/(r)-2-methylmalate dehydratase large subunit | BCF11_5114 | Not Available | Negative | 5552779 - 5554179 | 49969.1 |
| threonine/homoserine efflux transporter rhta | BCF11_5115 | Not Available | Negative | 5554357 - 5555241 | 31133.3 |
| hypothetical protein | BCF11_5116 | Not Available | Positive | 5556010 - 5556645 | 18535.5 |
| hypothetical protein | BCF11_5117 | Not Available | Positive | 5556745 - 5557593 | 27214.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
