Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylase i family protein | BCF11_5017 | Not Available | Positive | 5446896 - 5447282 | 14581.4 |
| atp-independent rna helicase dbpa | BCF11_5018 | Not Available | Positive | 5447365 - 5448744 | 50405.0 |
| luxr family transcriptional regulator | BCF11_5019 | Not Available | Positive | 5449097 - 5449807 | 26699.7 |
| n-acyl-l-homoserine lactone synthetase | BCF11_5020 | Not Available | Positive | 5450022 - 5450747 | 26780.3 |
| low temperature requirement protein ltra | BCF11_5021 | Not Available | Positive | 5450793 - 5451986 | 43789.2 |
| arac-like dna-binding protein | BCF11_5022 | Not Available | Negative | 5452006 - 5452950 | 34389.9 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | BCF11_5023 | Not Available | Positive | 5453146 - 5453880 | 25995.6 |
| taurine transport system permease protein | BCF11_5024 | Not Available | Negative | 5453920 - 5454819 | 32441.7 |
| taurine transport system atp-binding protein | BCF11_5025 | Not Available | Negative | 5454816 - 5455607 | 28738.7 |
| taurine transport system substrate-binding protein | BCF11_5026 | Not Available | Negative | 5455617 - 5456621 | 35307.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
