Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | BCF11_4946 | Not Available | Positive | 5364853 - 5365740 | 34938.6 |
| hypothetical protein | BCF11_4947 | Not Available | Negative | 5365748 - 5366128 | 13385.0 |
| carboxypeptidase c (cathepsin a) | BCF11_4948 | Not Available | Negative | 5366137 - 5367819 | 59116.6 |
| gntr family transcriptional regulator/mocr family aminotransferase | BCF11_4949 | Not Available | Negative | 5367937 - 5369370 | 52351.6 |
| ahpd family alkylhydroperoxidase | BCF11_4950 | Not Available | Positive | 5369528 - 5370001 | 17455.9 |
| tfox/sxy family transcriptional regulator of competence genes | BCF11_4951 | Not Available | Positive | 5370180 - 5370512 | 12137.5 |
| putative mfs family arabinose efflux permease | BCF11_4952 | Not Available | Negative | 5370550 - 5371863 | 46326.6 |
| nicotinamidase-related amidase | BCF11_4953 | Not Available | Negative | 5371901 - 5372464 | 19703.6 |
| dna-binding marr family transcriptional regulator | BCF11_4954 | Not Available | Negative | 5372503 - 5372952 | 15882.0 |
| hypothetical protein | BCF11_4955 | Not Available | Positive | 5373118 - 5373891 | 26829.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
