Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome o ubiquinol oxidase subunit 1 | BCF11_4780 | Not Available | Positive | 5191215 - 5193221 | 74721.6 |
| cytochrome o ubiquinol oxidase subunit 3 | BCF11_4781 | Not Available | Positive | 5193214 - 5193852 | 23640.1 |
| cytochrome o ubiquinol oxidase operon protein cyod | BCF11_4782 | Not Available | Positive | 5193849 - 5194352 | 18503.8 |
| surfeit locus 1 family protein | BCF11_4783 | Not Available | Positive | 5194362 - 5195222 | 30723.5 |
| two-component system sensor histidine kinase regb | BCF11_4784 | Not Available | Positive | 5195164 - 5196558 | 50142.4 |
| two-component system response regulator rega | BCF11_4785 | Not Available | Positive | 5196548 - 5197084 | 19713.9 |
| putative rdd family membrane protein yckc | BCF11_4786 | Not Available | Positive | 5197130 - 5197624 | 18772.1 |
| branched-chain amino acid transport system substrate-binding protein | BCF11_4787 | Not Available | Positive | 5197813 - 5199027 | 43613.9 |
| abc-type branched-subunit amino acid transport system substrate-binding protein | BCF11_4788 | Not Available | Positive | 5199237 - 5200355 | 40296.8 |
| udp-glucose 4-epimerase | BCF11_4789 | Not Available | Negative | 5200395 - 5201414 | 36960.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
