Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)-lysidine synthase | BCF11_4660 | Not Available | Positive | 5052282 - 5053703 | 52829.0 |
| aspartate kinase | BCF11_4661 | Not Available | Positive | 5053826 - 5055076 | 44652.8 |
| Trna-ser | Not Available | Not Available | Positive | 5055274 - 5055364 | Not Available |
| phosphatidylglycerol lysyltransferase | BCF11_4663 | Not Available | Positive | 5055571 - 5058180 | 94628.8 |
| type iv secretory pathway virj component | BCF11_4664 | Not Available | Positive | 5058177 - 5059589 | 48756.8 |
| simple sugar transport system substrate-binding protein | BCF11_4665 | Not Available | Positive | 5059985 - 5060953 | 34478.8 |
| simple sugar transport system atp-binding protein | BCF11_4666 | Not Available | Positive | 5061054 - 5062613 | 56200.3 |
| simple sugar transport system permease protein | BCF11_4667 | Not Available | Positive | 5062610 - 5063740 | 39330.4 |
| simple sugar transport system permease protein | BCF11_4668 | Not Available | Positive | 5063740 - 5064747 | 35609.0 |
| phytanoyl-coa dioxygenase phyh | BCF11_4669 | Not Available | Negative | 5064947 - 5065711 | 28061.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
