Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| farnesyl-diphosphate farnesyltransferase | BCF11_4530 | Not Available | Negative | 4908694 - 4909527 | 31656.1 |
| squalene synthase hpnc | BCF11_4531 | Not Available | Negative | 4909653 - 4910465 | 30693.2 |
| rnd family efflux transporter mfp subunit | BCF11_4532 | Not Available | Positive | 4910659 - 4911903 | 43803.6 |
| multidrug efflux pump subunit acrb | BCF11_4533 | Not Available | Positive | 4911900 - 4914995 | 112872.0 |
| Trna-leu | Not Available | Not Available | Positive | 4915135 - 4915218 | Not Available |
| crea protein | BCF11_4535 | Not Available | Positive | 4915377 - 4915874 | 17634.2 |
| trigger factor | BCF11_4536 | Not Available | Positive | 4916065 - 4917417 | 49933.5 |
| atp-dependent clp protease protease subunit | BCF11_4537 | Not Available | Positive | 4917500 - 4918126 | 22652.3 |
| atp-dependent clp protease atp-binding subunit clpx | BCF11_4538 | Not Available | Positive | 4918297 - 4919565 | 46028.6 |
| atp-dependent lon protease | BCF11_4539 | Not Available | Positive | 4919898 - 4922312 | 89078.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
