Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein yect (duf1311 family) | BCF11_4520 | Not Available | Positive | 4898519 - 4898908 | 14837.9 |
| outer membrane oprd family porin | BCF11_4521 | Not Available | Negative | 4899008 - 4900456 | 51499.1 |
| uncharacterized protein (tigr00255 family) | BCF11_4522 | Not Available | Negative | 4900674 - 4901567 | 32727.4 |
| hypothetical protein | BCF11_4523 | Not Available | Positive | 4901678 - 4902694 | 38478.7 |
| protein phosphatase | BCF11_4524 | Not Available | Positive | 4902773 - 4903687 | 33584.2 |
| ribonuclease ph | BCF11_4525 | Not Available | Positive | 4903769 - 4904503 | 26150.2 |
| tatd dnase family protein | BCF11_4526 | Not Available | Positive | 4904520 - 4905374 | 31100.2 |
| hypothetical protein | BCF11_4527 | Not Available | Positive | 4905367 - 4906050 | 24511.6 |
| l-lactate dehydrogenase (cytochrome) | BCF11_4528 | Not Available | Negative | 4906066 - 4907196 | 40421.1 |
| squalene-associated fad-dependent desaturase | BCF11_4529 | Not Available | Negative | 4907312 - 4908658 | 48493.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
