Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Collimonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Collimonas |
| Species | Collimonas sp. PA-H2 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1222070 bp
Thymine Count
1231824 bp
Guanine Count
1746065 bp
Cytosine Count
1745750 bp
Genome Length
5945709 bp
Protein-coding Genes
5176 genes
Non-Coding Genes
215 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan/xylan/chitin deacetylase (pgda/cda1 family) | BCF11_4510 | Not Available | Negative | 4887526 - 4888470 | 35098.0 |
| nucleoside-diphosphate-sugar epimerase | BCF11_4511 | Not Available | Negative | 4888558 - 4889613 | 39936.9 |
| methionyl-trna formyltransferase | BCF11_4512 | Not Available | Negative | 4889738 - 4890646 | 32431.3 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | BCF11_4513 | Not Available | Negative | 4890643 - 4891599 | 35627.4 |
| dtdp-4-amino-4,6-dideoxygalactose transaminase | BCF11_4514 | Not Available | Negative | 4891615 - 4892751 | 41071.2 |
| eama-like transporter family protein | BCF11_4515 | Not Available | Negative | 4892804 - 4893175 | 12967.4 |
| 4-amino-4-deoxy-l-arabinose transferase-like glycosyltransferase | BCF11_4516 | Not Available | Negative | 4893191 - 4894948 | 64850.3 |
| uncharacterized protein | BCF11_4517 | Not Available | Negative | 4894941 - 4895339 | 14755.7 |
| alanine-synthesizing transaminase | BCF11_4518 | Not Available | Positive | 4895763 - 4896992 | 45633.1 |
| homoserine dehydrogenase | BCF11_4519 | Not Available | Positive | 4897137 - 4898447 | 46516.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
